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Park, Lee, Seo, Cho, Choi, Yoon, Han, Park, and Kim: SALL4 Expression in Hepatocellular Carcinomas Is Associated with EpCAM-Positivity and a Poor Prognosis



There is increasing interest in hepatocellular carcinomas (HCC) expressing “stemness”-related markers, as they have been associated with aggressive behavior and poor prognosis. In this study, we investigated the usefulness of Sal-like protein 4 (SALL4), a recently proposed candidate marker of “stemness.”


Immunohistochemical stains were performed for SALL4, K19, and epithelial cellular adhesion molecule (EpCAM) on tissue microarrays constructed from 190 surgically resected HCCs, and the results were correlated with the clinicopathological features and patient survival data.


Nuclear SALL4 expression was observed in 39/190 HCCs (20.5%), while K19 and EpCAM were expressed in 30 (15.9%) and 92 (48.7%) HCCs, respectively. The nuclear expression was generally weak, punctate or clumped. SALL4 expression was significantly associated with a poor overall survival compared to SALL4-negative HCCs (p = .014) compared to SALL4-negative HCCs. On multivariate analysis adjusted for tumor size, multiplicity, vascular invasion, and pathological tumor stage, SALL4 remained as a significant independent predictor of decreased overall survival (p= .004). SALL4 expression was positively correlated with EpCAM expression (p = .013) but not with K19 expression. HCCs that expressed both SALL4 and EpCAM were associated with significantly decreased overall survival, compared to those cases which were negative for both of these markers (p = .031).


Although SALL4 expression was not significantly correlated with other clinicopathological parameters suggestive of tumor aggressiveness, SALL4 expression was an independent predictor of poor overall survival in human HCCs, and was also positively correlated with EpCAM expression.

Hepatocellular carcinoma (HCC) is one of the leading causes of cancer mortality in the world, with a limited number of currently available therapeutic options. Recent advances in research have suggested various molecular classifications for HCC, for example the “hepatoblast signature,” “cholangiocarcinoma-like signature,” “epithelial cellular adhesion molecule (EpCAM)–positive signature,” and “5-gene score,” which help to identify subsets of HCC with poor prognosis and aggressive biological behavior, and which also point to the heterogeneity of HCC [1-4]. Translating the molecular classifications into surgical pathology practice would potentially add more functionally and clinically relevant information in addition to the purely morphological diagnosis, and such endeavors have resulted in new classifications of various cancers, including HCC, which reflect the histopathological, immunophenotypical and molecular features of the tumors.
Interestingly, a remarkable number of the proposed poor prognostic signatures for HCC are related to “stemness,” and the expression of hepatic stem/progenitor cell–related markers in HCCs have been associated with an aggressive clinical behavior, compared to conventional HCCs that do not express these markers [5,6]. It may be speculated that HCCs with “stemness”-related marker expression result from the malignant transformation of hepatic stem/progenitor cells, or from the dedifferentiation of conventional HCCs that acquire “stemness”-related markers during tumor progression. Whatever the pathogenesis, these tumors show features of aggressive behavior, such as frequent vascular invasion, and poor prognosis, up-regulation of epithelial-mesenchymal transition-related genes, longer telomeres and increased resistance to chemotherapeutic agents [5,7,8].
It is still uncertain which marker is the best one for identifying this aggressive subgroup of HCCs; most of the recent literature has focused on K19, EpCAM, and CD133. Recent studies have proposed as a novel marker for the progenitor subclass of HCC Sal-like protein 4 (SALL4), which is known to be an important regulator of pluripotency in embryonic stem cells [9-12]. In this study, we investigated the usefulness of SALL4 as a prognostic marker and a marker of “stemness” in HCC.


Case selection and review

This study was approved by the Institutional Review Board of Seoul National University Bundang Hospital (B-1502-286-302). One hundred and ninety consecutive cases of surgically resected or explanted HCCs were enrolled in this study, and were retrieved from the surgical pathology files of Seoul National University Bundang Hospital from May 2003 to April 2010. The clinicopathological characteristics of the cases are summarized in Table 1. The electronic medical records, surgical pathology reports, and the hematoxylin and eosin-stained slides were reviewed for each case, and the clinicopathological variables noted included tumor size, multiplicity (including intrahepatic metastasis/satellite nodules and multicentric occurrences), histological differentiation according to the Edmondson-Steiner grade (the highest grade in tumors with heterogeneity), the presence of microvascular or major vascular invasion, the patient demographics (age and sex), and the presence of an underlying etiology (e.g., hepatitis B, C, alcohol). Follow-up data was also obtained from the medical records, including recurrences (including local recurrence and distant metastasis) and death. The median follow-up period was 52 months (range, 0 to 133 months). Overall survival was defined as thfe interval from initial surgical treatment for HCC to the date of death, and disease-free survival as the interval from initial treatment to local or distant recurrence.

Tissue microarray construction and immunohistochemistry

Tissue cores measuring 2 mm in diameter were sampled from formalin-fixed paraffin-embedded HCC tissues and arranged in recipient tissue array blocks using a trephine apparatus (Superbiochips Laboratories, Seoul, Korea). Two or three cores were sampled from each HCC, depending on the amount of histological heterogeneity present in the tumor. One core was sampled from the corresponding non-neoplastic liver for each case. Four μm-thick sections were obtained from the tissue microarray blocks and subjected to immunohistochemical staining for SALL4 (1:100, mouse monoclonal antibody, clone EE-30, Santa Cruz Technologies Inc., Santa Cruz, CA, USA), K19 (1:150, mouse monoclonal antibody, clone BA17, Dako, Glostrup, Denmark) and EpCAM (1:3,000, mouse monoclonal antibody, clone VU-1D9, Calbiochem, Darmstadt, Germany). Briefly, tissue sections were deparaffinized in xylene, rehydrated in graded alcohol, and antigen retrieval was performed using citrate buffer (pH 6.0) for 15 minutes. Sections were incubated with the primary antibodies at room temperature for 30 minutes, and then incubated with secondary antibodies (EnVision Detection System, Dako). Counterstaining was performed using Mayer’s hematoxylin and the stained slides were mounted.
SALL4 was expressed in the tumor cell nuclei, and positivity for SALL4 expression was defined as nuclear staining for the protein in more than 10% of the tumor cells after calculating the SALL4-labeling index (a ratio of positive nuclei/total nuclei under the 400× field magnification) with the help of the Image J software (downloaded from http://imagej.nih.gov/ij). A testicular seminoma tissue sample was used as a positive control for SALL4. Membranous and/or cytoplasmic staining in the tumor cells were counted as positive for EpCAM and K19.

Statistical analysis

All statistical analyses were conducted using IBM SPSS ver. 21 (IBM Corp., Armonk, NY, USA). Chi-square, Fisher’s exact and t tests were performed as deemed appropriate. Univariable analyses for overall survival and disease-free survival were performed using the Kaplan-Meier method and log-rank tests. Statistically significant variables from the univariable analysis were entered into the multivariable analyses using the Cox proportional hazard method. Statistical significance was defined as p<.05.


SALL4, K19, and EpCAM expression in HCC

The immunohistochemical stain results and the expression frequencies of SALL4, K19, and EpCAM are summarized in Figs. 1 and 2, respectively. The SALL4 nuclear labeling index ranged from 0% to 78.9% (mean±standard deviation, 8.9±19.2%) in the 190 HCCs, and 39 cases (20.5%) were deemed positive for SALL4 expression (labeling index ≥10%). Although a definite nuclear staining was present in the tumor cells, the intensity of staining was generally not as strong as in the positive control tissue (testicular seminoma) (Fig. 1AC). In some areas, the nuclear staining was punctate and only identifiable at higher power magnification. SALL4 positivity was generally uniformly distributed in the HCCs without predilections for a particular morphological tumor cell: some SALL4-positive tumor cells were small with increased nuclear/cytoplasmic ratios reminiscent of the stem/progenitor cell phenotype, while others were more typical HCCs with various degrees of differentiation. In the adjacent non-neoplastic liver, the hepatocytes and bile ducts did not stain for SALL4, and interestingly, SALL4 positivity was seen in occasional ductular reactions, although the staining was very faint and barely visible (Fig. 1D).
K19 and EpCAM expression data were available for 189 cases (due to tissue core loss in 1 case). K19 and EpCAM were expressed in 30 (15.9%) and 92 (48.7%) cases, respectively, in the typical membranous/cytoplasmic pattern, and they were also expressed in the bile ducts and ductular reactions in the non-neoplastic livers. A significant positive correlation was seen between EpCAM and K19 expression: K19 positivity was seen in 27 out of 92 EpCAM-positive HCCs (29.3%) compared to 3 out of 97 EpCAM negative HCCs (3.1%) (p<.001). SALL4 expression was more frequently seen in EpCAM-positive HCCs (26/92, 28.3%) compared to EpCAM-negative HCCs (13/97, 13.4%) (p=.013) (Fig. 1E, F). However, there was no significant correlation between SALL4 and K19 expression: only 3.2% of the HCCs demonstrated positivity for both SALL4 and K19 (Fig. 2). The relationships between the expression of SALL4, K19, and EpCAM in HCCs are summarized in a Venn diagram in Fig. 2.

Correlation with clinicopathological variables and survival

Univariable analysis demonstrated that SALL4 expression was significantly associated with reduced overall survival (p=.014) (Fig. 3A). In addition to SALL4 expression, larger tumor size (>3 cm, p=.045), multiplicity of tumor (p=.001), major vascular invasion (p=.046) and higher T stage (stage 3 or 4, p<.001) were significantly associated with decreased overall survival. In comparison, SALL4 expression was not significantly associated with disease-free survival (Fig. 3B), while larger size (>3 cm, p=.009), multiplicity (p=.002) and higher T stage (stage 3 or 4, p=.019) were significantly associated with reduced disease-free survival. HCCs with K19 expression had a tendency for decreased overall survival, although this result was not statistically significant (p=.063), while disease-free survival was significantly decreased for K19 expressing HCCs (p=.001) (Fig. 3C, D). EpCAM expression was associated with a tendency for decreased overall survival (p=.053); however, it was not associated with disease-free survival.
Interestingly, when we performed the survival analysis after combining EpCAM and SALL4 expression status, HCCs that expressed both SALL4 and EpCAM were associated with significantly decreased overall survival, compared to those cases which were negative for both these markers (p=.031) (Fig. 4). In addition, while EpCAM-negative HCCs were associated with a relatively favorable outcome compared to EpCAM-positive HCCs during the earlier follow-up period (<5 years), EpCAM-negative HCCs with SALL4-positivity showed an abrupt decrease in overall survival after 5 years of follow-up.
On multivariable analysis, SALL4 (p=.004), multiplicity (p=.016) and higher T stage (p=.004) remained as significant independent predictors of decreased overall survival (Table 2). For disease-free survival, larger tumor size (>3 cm, p=.019), and multiplicity (p=.004) were independent prognostic factors.
SALL4 expression was not significantly associated with other clinicopathological parameters of tumor aggressiveness, such as presence of vascular invasion, larger tumors, and multiplicity (Table 3). On the other hand, EpCAM expression in HCCs was more frequently associated with poor histological differentiation (p=.019), microvascular invasion (p=.011), younger age (p=.020), B-viral etiology (p=.010), and high serum α-fetoprotein (AFP) levels (p=.023), and K19 expression was more frequently associated with higher serum AFP levels (p=.032), major vascular invasion (p=.010), and higher pathological T stage (3 or 4, p=.011). Increased tumor size was also more frequent in K19-positive HCCs, although not statistically significant (p=.076).


HCCs with “stemness”-related marker expression—those that have the histomorphological features of conventional HCCs but express markers related to stemness on immunohistochemistry—have been receiving increasing interest over the past several years, as there is accumulating evidence that they are associated with aggressive behavior and poor prognosis, compared to conventional HCCs that do not express these markers [5,6]. The more frequently discussed markers of stemness in HCCs include K19, EpCAM, and CD133; however, it is still uncertain which marker best represents stemness in HCCs, and there is still a growing number of putative markers of stemness in the literature, including the recently proposed SALL4, which need further validation [10]. We were interested to see whether SALL4 expression in HCCs is indeed associated with the expression of other more established markers of stemness (K19 and EpCAM) and whether it has clinicopathological implications in our cohort of resected HCCs. Interestingly, we found SALL4 expression in 20.5% of HCCs, that SALL4 expression is positively correlated with EpCAM expression, and also that it has prognostic implications.
SALL4 is a zinc finger transcriptional activator located on chromosome 20q13.13-13.2 that is required for the maintenance of pluripotent embryonic stem cells, potentially through interactions with Oct3/4, Sox2, and Nanog [12-14]. Mutation in SALL4 results in the Okihiro syndrome, a rare autosomal dominant disorder characterized by multiple organ defects [14]. SALL4 has been found to be expressed in leukemias and hematopoietic stem cells, and also in solid tumors such as germ cell tumors and AFP-producing gastric cancers, suggesting that SALL4 may be a marker of embryonic stem cells and also cancer stem cells [15-18]. In the fetal murine liver, SALL4 has been shown to be expressed in hepatic stem/progenitor cells, but the expression diminishes gradually during development and is not seen in adult hepatocytes [19]. These findings suggest that SALL4 may be a good marker of hepatic stem/progenitor cells and HCC cancer stem cells.
Over the past two years, there has been increasing interest in SALL4 as a potential marker for identifying HCCs with features of “stemness,” aggressive behavior, and poor prognosis. Oikawa et al. [9] demonstrated a decreased overall survival in their profiling analysis of 110 HCCs (from the microarray dataset published by Lee et al. [1]), and also showed that the overexpression of SALL4 in liver cancer cells induced the expression of K19 and EpCAM, suggesting that SALL4 may be a marker of stem cells. Zeng et al. [11] demonstrated a decreased recurrence-free survival in SALL4-positive HCCs, and SALL4 activation in cell lines resulted in the up-regulation of hepatic stem cell markers KRT19, EPCAM, and CD44. Another extensive study showed a poor overall survival in SALL4-positive HCCs in two independent cohorts (Singapore, n=179; Hong Kong, n=228), in addition to an enrichment of progenitor-like gene signatures and overexpression of proliferative and metastatic genes on gene expression analysis [10]. In another recent analysis of Western HCCs, higher tumor grade, more frequent lymphovascular invasion and shorter recurrence-free and overall survivals were seen in SALL4-positive HCCs, although the SALL4-positivity was only seen very rarely (1.3%), suggesting differences in SALL4 expression status according to the etiology of HCC [20]. The expression frequency of SALL4 in HCC has in fact varied widely in different reports, ranging from 1.3% to 85% [9-11,20,21]. It is plausible that a higher prevalence of hepatitis B virus infection may account for the higher frequency of SALL4-positivity in Eastern HCCs; interestingly, SALL4-positivity has been shown to be more frequently associated with hepatitis B virus infection [11]. In addition, the differences in the antibodies, immunohistochemistry protocols, and the interpretation methods for defining “SALL4-positivity” are also likely to account for the wide range of SALL4-positivity reported in the literature.
As it has been previously demonstrated that nuclear labeling for SALL4 in liver tissues is seen with high pH antigen retrieval and not as clearly with the conventional citrate buffer [9], we also stained the same tissue microarrays for SALL4 using a different antigen retrieval method (Tris-EDTA buffer; pH 9.0) to see if there were differences in the staining pattern or frequency; however, the results were identical (data not shown). Therefore, SALL4 immunostaining is feasible using the citrate buffer (pH 6.0) for antigen retrieval. We found that the nuclear staining for SALL4 in the testicular seminoma was very intense, diffuse and finely granular, in comparison to most SALL4-positive HCCs in which the nuclear staining was weaker and punctate or clumped, similar to a previous report [21]. In practice, when faced with the occasional diagnostic challenge of discriminating between HCC and yolk sac tumor—which may have similar morphological features and also positivity for AFP and glypican-3—SALL4 immunohistochemistry may play a role, as the strong and diffuse staining for SALL4 is rarely seen in HCCs [21]. However, as for the utility of SALL4 in HCCs as a prognostic marker and a marker of “stemness,” further validation in independent cohorts of HCC would be necessary, as the staining is not as intense, and there is likely to be interobserver variation in the interpretation of SALL4 positivity. Although we found a significantly decreased overall survival and a higher frequency of EpCAM positivity in SALL4-positive HCCs compared to SALL4-negative HCCs, we performed a semi-manual count of the SALL4-labeling index with the help of an image analysis software, which is not always a feasible method in routine pathology practice in comparison to the distinct cytoplasmic staining for K19 or EpCAM.
Our finding of a positive correlation between SALL4 and EpCAM expression in HCCs, poor overall survival in SALL4-positive HCCs, and positive (albeit weak and sporadic) staining in the ductular reactions support the recent literature that SALL4 may be a useful marker of “stemness” in hepatic stem/progenitor cells and HCCs. However, in contrast to K19 or EpCAM, the nuclear staining is not as easily appreciable by immunohistochemistry, and other than being a prognostic indicator of poor overall survival, there were no significant correlations between SALL4 positivity and the clinicopathological parameters suggestive of aggressiveness. Therefore, while SALL4 is an independent prognostic factor for decreased overall survival in HCC patients and may be a potential marker for identifying the aggressive subgroup of HCCs with “stemness” features, further validation in larger HCC cohorts is required prior to further consideration of SALL4 as a good marker of “stemness” in liver specimens.


Conflicts of Interest

No potential conflict of interest relevant to this article was reported.


This study was supported by grant number 14-2014-012 from the SNUBH Research Fund, and the Basic Science Research Program through NRF funded by the Ministry of Education (2013R1A1A2062320).

Fig. 1.
Immunohistochemical stain results. Nuclear SALL4 staining is seen in a case of HCC (A), which is weaker and clumped (inset) compared to the strong nuclear staining seen in testicular seminoma (B). Clumped nuclear SALL4 expression is seen in another case of HCC with fibrous stroma (C). The non-neoplastic liver is negative for SALL4, except for occasional faintly positive cells in the ductular reactions (D, arrows). Nuclear SALL4 staining (E) is seen in an HCC with EpCAM expression (F). SALL4, Sal-like protein 4; HCC, hepatocellular carcinoma; EpCAM, epithelial cellular adhesion molecule.
Fig. 2.
Venn diagram summarizing the relationships between the expression of SALL4 (pink), K19 (blue), and EpCAM (green) in HCCs. While SALL4 expression is frequently co-expressed with EpCAM (26/39, 66.7%), K19 expression was only seen in 6 of SALL4-positive HCCs (15.4%). SALL4, Sal-like protein 4; EpCAM, epithelial cellular adhesion molecule; HCC, hepatocellular carcinoma. aTotal n=189 with SALL4, EpCAM, and K19 data.
Fig. 3.
Kaplan-Meier survival curves demonstrating decreased overall survival (A) and disease-free survival (B) in HCCs with SALL4 expression, and decreased overall survival (C) and disease-free survival (D) in HCCs with K19 expression. HCC, hepatocellular carcinoma; SALL4, Sal-like protein 4.
Fig. 4.
Kaplan-Meier survival curves demonstrating the differences in overall survival in HCCs after combining EpCAM and SALL4 expression status. HCC, hepatocellular carcinoma; EpCAM, epithelial cellular adhesion molecule; SALL4, Sal-like protein 4.
Table 1.
Clinicopathologic characteristics of the HCC patients (n = 190)
Characteristic No. (%)
Age (yr) 58.1 ± 11.8
 Male 151 (79.5)
 Female 39 (20.1)
 Hepatitis B 136 (71.6)
 Hepatitis C 17 (8.9)
 Alcohol 8 (4.2)
 Others 30 (15.8)
Serum alpha-fetoprotein (IU/mL) 1,634.6 ± 4,590.4
Serum PIVKA-II (AU/mL) 661.2 ± 1,528.9
 Absent 106 (55.8)
 Present 31 (16.3)
 Tumor size (cm)a 4.6 ± 3.0
Edmondson-Steiner grade
 I 1 (0.5)
 II 47 (24.7)
 III 122 (64.2)
 IV 20 (10.5)
Microvascular invasion
 Absent 116 (61.1)
 Present 74 (38.9)
Major vessel invasionb
 Absent 168 (88.4)
 Present 22 (11.6)
 Recurrencec 102 (53.7)
 Deaths due to HCC 24 (12.6)

Values are presented as mean ± standard deviation or number (%).

HCC, hepatocellular carcinomas.

a Size of largest tumor in case of multiple tumors;

b Main or first order branches of portal vein and/or one or more of right, middle or left hepatic veins;

c Local recurrence or distant metastasis.

Table 2.
Multivariable analysis results: independent predictors of decreased overall survival and disease-free survival
p-value Hazard ratio 95% Confidence interval
Lower Upper
Overall survival
 SALL4 positivity .004 3.556 1.511 8.367
 Multiplicity of tumor .016 2.929 1.223 7.014
 High T stage (T3 and 4) .004 3.583 1.486 8.636
Disease-free survival
 Size (> 3 cm) .019 1.703 1.092 2.656
 Multiplicity of tumor .004 1.937 1.234 3.039

SALL4, Sal-like protein 4.

Table 3.
Clinicopathologic characteristics and immunohistochemical stain results of 190 HCCs
p-value K19a
p-value EpCAMa
Negative Positive Negative Positive Negative Positive
Frequency 151 (79.5) 39 (20.5) 159 (84.1) 30 (15.9) 97 (51.3) 92 (48.7)
Age (yr) .858 .694 .020
 < 60 81 (53.6) 20 (51.3) 83 (52.2) 17 (56.7) 43 (44.3) 57 (62.0)
 ≥ 60 70 (46.4) 19 (48.7) 76 (47.8) 13 (43.3) 54 (55.7) 35 (38.0)
Sex 1.000 .808 .113
 Male 32 (21.2) 8 (20.5) 33 (20.8) 7 (23.3) 16 (16.5) 24 (26.1)
 Female 119 (78.8) 31 (79.5) 126 (79.2) 23 (76.7) 81 (83.5) 68 (73.9)
Etiology .319 .829 .010
 Hepatitis B virus–related 40 (26.5) 14 (35.9) 45 (29.3) 9 (30.0) 36 (37.1) 18 (19.6)
 Non-hepatitis B virus–related 111 (73.5) 25 (64.1) 114 (71.7) 8 (70.0) 61 (62.9) 74 (80.3)
Serum α-fetoprotein (IU/mL) (n = 132) 1.000 .032 .023
 < 1,000 76 (76) 25 (78.1) 86 (80.4) 14 (58.3) 54 (85.7) 46 (79.3)
 ≥ 1,000 24 (24) 7 (21.9) 21 (19.6) 10 (41.7) 9 (14.3) 22 (20.7)
Multiplicity .825 .328 .372
 Absent 120 (79.5) 32 (82.1) 129 (81.1) 22 (73.3) 80 (82.5) 71 (77.2)
 Present 31 (20.5) 7 (17.9) 30 (18.9) 8 (26.7) 17 (17.5) 21 (22.8)
Tumor size (cm)b .432 .076 .873
 < 5 105 (69.5) 30 (76.9) 118 (74.2) 17 (56.7) 70 (72.2) 65 (70.7)
 ≥ 5 16 (30.5) 9 (23.1) 41 (25.8) 13 (43.3) 27 (27.8) 27 (29.3)
Pathologic T stage 1.000 .011 .266
 pT1/pT2 122 (80.8) 32 (82.1) 134 (84.3) 19 (63.3) 82 (84.5) 71 (77.2)
 pT3a/pT3b/pT4 29 (19.2) 7 (17.9) 25 (15.7) 11 (36.7) 15 (15.5) 21 (22.8)
Edmondson-Steiner grade .410 .648 .019
 I/II 36 (23.8) 12 (30.8) 42 (26.4) 6 (20.0) 32 (33) 16 (17.4)
 III/IV 115 (76.2) 27 (69.2) 117 (73.6) 24 (80.0) 65 (67) 76 (82.6)
Microvascular invasion .581 .685 .011
 Absent 94 (62.3) 22 (56.4) 98 (61.6) 17 (56.7) 68 (70.1) 47 (51.1)
 Present 57 (37.7) 17 (43.6) 61 (38.4) 13 (43.3) 29 (29.9) 45 (48.9)
Major vessel invasionc .781 .010 .366
 Absent 134 (88.7) 34 (87.2) 145 (91.2) 22 (73.3) 88 (90.7) 79 (85.9)
 Present 17 (11.3) 5 (12.8) 14 (8.8) 8 (26.7) 9 (9.3) 13 (14.1)

Values are presented as number (%).

HCC, hepatocellular carcinomas; SALL4, Sal-like protein 4; EpCAM, epithelial cellular adhesion molecule.

a n = 189 (tissue core loss in 1 case);

b Size of largest tumor in case of multiple tumors;

c Main or first order branches of portal vein and/or one or more of right, middle or left hepatic veins.


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